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- Data Repository United States Compatibility:Not yet registeredPartners:CRBS, UMMS, CRBS, TCG Bioinformatics, Computational Neuroscience, NeuroscienceCRBS,UMMS,CRBS,TCG
re3data: r3d100011515
Neuroimaging Informatics Tools and Resources Collaboratory Resources Registry (NITRC-R) describes software tools and resources, vocabularies, test data, and databases. It is intended to extend the impact and longevity of previously funded neuroimaging informatics contributions. NITRC-R gives researchers access to tools and resources, categorization and organization of existing tools and resources, facilitation of interactions between researchers and developers, and promotion of best practices through enhanced documentation and tutorials. NITRC’s scientific focus includes: MR, PET/SPECT, CT, EEG/MEG, optical imaging, clinical neuroimaging, computational neuroscience, and imaging genomics software tools, data, and computational resources.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC) Functional Genomics, Molecular biology, Medical MicrobiologyEukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC)
re3data: r3d100011557
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB) focuses on eukaryotic pathogens and invertebrate vectors of infectious diseases, , encompassing data from prior resources devoted to parasitic species (EuPathDB), fungi (FungiDB) and vector species (VectorBase). While each of the taxonomic groups within this resource is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all of these resources, and the opportunity to leverage orthology for searches across genera.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Computer Sciences, University of Wisconsin, Madison, USA Bioinformatics, Life Science, Nucleic acid sequenceDepartment of Computer Sciences, University of Wisconsin, Madison, USA
MetaSRA is a database of normalized SRA human sample-specific metadata following a schema inspired by the metadata organization of the ENCODE project. This schema involves mapping samples to terms in biomedical ontologies, labeling each sample with a sample-type category, and extracting real-valued properties.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:PML Mathematics, Software Engineering, SoftwarePML
A cross-index and virtual repository of mathematical and statistical software components of use in computational science and engineering.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:ORNL, US Department of Energy, Office of Science, Nuclear Physics NP Natural Sciences, Condensed Matter Physics, Optics, Quantum Optics and Physics of Atoms, Molecules and PlasmasORNL,US Department of Energy, Office of Science, Nuclear Physics NP
re3data: r3d100010712
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, United States, China (People's Republic of) Compatibility:Not yet registeredPartners:EBI, WSU, National Center for Protein Sciences, Beijing, China, UCSD, ISB Proteomics, Life Science, Peptide identificationEBI,WSU,National Center for Protein Sciences, Beijing, China,UCSD,ISB
re3data: r3d100010692
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Netherlands Compatibility:OpenAIRE Data (funded, referenced datasets)Partners:HN, CINES, CLARIN, CNRS, Laboratoire de Langues & Civilisations à Tradition Orale +2 partners Linguistics, Humanities, Humanities and Social SciencesHN,CINES,CLARIN,CNRS,Laboratoire de Langues & Civilisations à Tradition Orale,Laboratoire Ligérien de Linguistique,CCIN2P3/CNRSOAI-PMH URL: https://cocoon.huma-num.fr/crdo_servlet/oai-pmh
Collections de corpus oraux numériques
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:collected from a compatible aggregatorPartners:The University of Texas at Austin, University of Texas at Austin, Department of Psychology, Microsoft Research, GitHub, Inc., Indiana University, Pervasive Technology Institute, Jetstream +1 partners Basic Biological and Medical Research, Biology, Humanities and Social SciencesThe University of Texas at Austin,University of Texas at Austin, Department of Psychology,Microsoft Research,GitHub, Inc.,Indiana University, Pervasive Technology Institute, Jetstream,NSF
re3data: r3d100012397 , r3d100013223
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The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
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- Data Repository United States Compatibility:Not yet registeredPartners:CRBS, UMMS, CRBS, TCG Bioinformatics, Computational Neuroscience, NeuroscienceCRBS,UMMS,CRBS,TCG
re3data: r3d100011515
Neuroimaging Informatics Tools and Resources Collaboratory Resources Registry (NITRC-R) describes software tools and resources, vocabularies, test data, and databases. It is intended to extend the impact and longevity of previously funded neuroimaging informatics contributions. NITRC-R gives researchers access to tools and resources, categorization and organization of existing tools and resources, facilitation of interactions between researchers and developers, and promotion of best practices through enhanced documentation and tutorials. NITRC’s scientific focus includes: MR, PET/SPECT, CT, EEG/MEG, optical imaging, clinical neuroimaging, computational neuroscience, and imaging genomics software tools, data, and computational resources.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC) Functional Genomics, Molecular biology, Medical MicrobiologyEukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC)
re3data: r3d100011557
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB) focuses on eukaryotic pathogens and invertebrate vectors of infectious diseases, , encompassing data from prior resources devoted to parasitic species (EuPathDB), fungi (FungiDB) and vector species (VectorBase). While each of the taxonomic groups within this resource is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all of these resources, and the opportunity to leverage orthology for searches across genera.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Computer Sciences, University of Wisconsin, Madison, USA Bioinformatics, Life Science, Nucleic acid sequenceDepartment of Computer Sciences, University of Wisconsin, Madison, USA
MetaSRA is a database of normalized SRA human sample-specific metadata following a schema inspired by the metadata organization of the ENCODE project. This schema involves mapping samples to terms in biomedical ontologies, labeling each sample with a sample-type category, and extracting real-valued properties.
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A cross-index and virtual repository of mathematical and statistical software components of use in computational science and engineering.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:ORNL, US Department of Energy, Office of Science, Nuclear Physics NP Natural Sciences, Condensed Matter Physics, Optics, Quantum Optics and Physics of Atoms, Molecules and PlasmasORNL,US Department of Energy, Office of Science, Nuclear Physics NP
re3data: r3d100010712
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom, United States, China (People's Republic of) Compatibility:Not yet registeredPartners:EBI, WSU, National Center for Protein Sciences, Beijing, China, UCSD, ISB Proteomics, Life Science, Peptide identificationEBI,WSU,National Center for Protein Sciences, Beijing, China,UCSD,ISB
re3data: r3d100010692
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
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For further information contact us at helpdesk@openaire.eu - Data Repository France, Netherlands Compatibility:OpenAIRE Data (funded, referenced datasets)Partners:HN, CINES, CLARIN, CNRS, Laboratoire de Langues & Civilisations à Tradition Orale +2 partners Linguistics, Humanities, Humanities and Social SciencesHN,CINES,CLARIN,CNRS,Laboratoire de Langues & Civilisations à Tradition Orale,Laboratoire Ligérien de Linguistique,CCIN2P3/CNRSOAI-PMH URL: https://cocoon.huma-num.fr/crdo_servlet/oai-pmh
Collections de corpus oraux numériques
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:collected from a compatible aggregatorPartners:The University of Texas at Austin, University of Texas at Austin, Department of Psychology, Microsoft Research, GitHub, Inc., Indiana University, Pervasive Technology Institute, Jetstream +1 partners Basic Biological and Medical Research, Biology, Humanities and Social SciencesThe University of Texas at Austin,University of Texas at Austin, Department of Psychology,Microsoft Research,GitHub, Inc.,Indiana University, Pervasive Technology Institute, Jetstream,NSF
re3data: r3d100012397 , r3d100013223
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, United Kingdom Compatibility:Not yet registeredPartners:UWMC , EBI, UD Proteomics, Life Science, Molecular structureUWMC ,EBI,UD
The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
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