- CN
- CZ
- SE
- Thematic: No
- CN
- CZ
- SE
- Thematic: No
- Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WMC Biomedical Science, mutation analysis, mutationWMC
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, geneCUCKOO
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:State Key Laboratory of Microbial Technology, Shandong University, Jinan, China Life Science, structure, hydrophobicityState Key Laboratory of Microbial Technology, Shandong University, Jinan, China
Indel Flanking Region Database is an online resource for indels (insertion/deletions) and the flanking regions of proteins in SCOP superfamilies. It aims at providing a comprehensive dataset for analyzing the qualities of amino acid indels, substitutions and the relationship between them.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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For further information contact us at helpdesk@openaire.eu - Data Repository Czech Republic Compatibility:Not yet registeredPartners:Multimodal and Functional Imaging Laboratory, Central European Institute of Technology (CEITEC), Brno, Czech Republic Biomedical Science, Neuroscience, Computational NeuroscienceMultimodal and Functional Imaging Laboratory, Central European Institute of Technology (CEITEC), Brno, Czech Republic
MRI data for brain and mind research incl. simultaneous recording of EEG and electrophysiology. This resource has restricted access.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Sweden Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:Luleå University of Technology MultidisciplinaryLuleå University of TechnologyOAI-PMH URL: http://ltu.diva-portal.org/dice/oai
This site is a university repository providing access to the publication output of the institution. A few publications are not available in full-text, and these are clearly marked within the site's display. The site interface is available in English or Swedish, and the supporting documentation is available in both languages. Users may set up an RSS feed to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CBI Genomics, cell adhesion, small moleculeCBI
OKCAM (Ontology-based Knowledgebase for Cell Adhesion Molecules) is an online resource for human genes known or predicted to be related to the processes of cell adhesion. These genes include members of the cadherin, immunoglobulin/FibronectinIII (IgFn), integrin, neurexin, neuroligin, and catenin families.
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Repository covering the research publications and student theses produced by the researchers and students of the University of Dalarna. Some of the publications are available in full text. The repository interface is available in English, Norwegian and Swedish. The searching service is split between researcher and student produced material.
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For further information contact us at helpdesk@openaire.eu
- Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WMC Biomedical Science, mutation analysis, mutationWMC
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CUCKOO Life Science, deoxyribonucleic acid, geneCUCKOO
The database is gene-centered and organized by paralog family. It focused on the paralogs and the duplication events in the evolution. The paralog families and paralogons can be searched by text or sequence, and are downloadable from the website in plain text files.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:NGDC, CNCB / BIG, CAS Comparative Genomics, Population Genetics, whole genome sequencing assayNGDC, CNCB / BIG, CAS
Virtual Chinese Genome Database (VCGDB) is a genome database of the Chinese population based on the whole genome sequencing data of 194 individuals. We are unsure when this database was last updated, and as such we have marked this record as Uncertain. Please contact us if you have any information on its current status.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:State Key Laboratory of Microbial Technology, Shandong University, Jinan, China Life Science, structure, hydrophobicityState Key Laboratory of Microbial Technology, Shandong University, Jinan, China
Indel Flanking Region Database is an online resource for indels (insertion/deletions) and the flanking regions of proteins in SCOP superfamilies. It aims at providing a comprehensive dataset for analyzing the qualities of amino acid indels, substitutions and the relationship between them.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:Ming Chen's Lab, Zhejiang University, Hangzhou, China Life Science, Gene name, DNA sequenceMing Chen's Lab, Zhejiang University, Hangzhou, China
Natural Antisense Transcripts (NATs), a kind of regulatory RNAs, occur prevalently in plant genomes and play significant roles in physiological and/or pathological processes. PlantNATsDB (Plant Natural Antisense Transcripts DataBase) is a platform for annotating and discovering NATs by integrating various data sources. PlantNATsDB also provides an integrative, interactive and information-rich web graphical interface to display multidimensional data, and facilitate plant research community and the discovery of functional NATs.
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For further information contact us at helpdesk@openaire.eu - Data Repository Czech Republic Compatibility:Not yet registeredPartners:Multimodal and Functional Imaging Laboratory, Central European Institute of Technology (CEITEC), Brno, Czech Republic Biomedical Science, Neuroscience, Computational NeuroscienceMultimodal and Functional Imaging Laboratory, Central European Institute of Technology (CEITEC), Brno, Czech Republic
MRI data for brain and mind research incl. simultaneous recording of EEG and electrophysiology. This resource has restricted access.
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For further information contact us at helpdesk@openaire.eu - Data Repository Czech Republic Compatibility:OpenAIRE Data (funded, referenced datasets)Partners:AVCR, KNAV Humanities and Social Sciences, Life Sciences, Natural SciencesAVCR,KNAVOAI-PMH URL: https://asep.lib.cas.cz/i2/i2.ws.oai.clsAll Research products
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Sweden Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:Luleå University of Technology MultidisciplinaryLuleå University of TechnologyOAI-PMH URL: http://ltu.diva-portal.org/dice/oai
This site is a university repository providing access to the publication output of the institution. A few publications are not available in full-text, and these are clearly marked within the site's display. The site interface is available in English or Swedish, and the supporting documentation is available in both languages. Users may set up an RSS feed to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:CBI Genomics, cell adhesion, small moleculeCBI
OKCAM (Ontology-based Knowledgebase for Cell Adhesion Molecules) is an online resource for human genes known or predicted to be related to the processes of cell adhesion. These genes include members of the cadherin, immunoglobulin/FibronectinIII (IgFn), integrin, neurexin, neuroligin, and catenin families.
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Sweden Compatibility:OpenAIRE 2.0+ (DRIVER OA, EC funding)Partners:DU MultidisciplinaryDUOAI-PMH URL: http://du.diva-portal.org/dice/oai
Repository covering the research publications and student theses produced by the researchers and students of the University of Dalarna. Some of the publications are available in full text. The repository interface is available in English, Norwegian and Swedish. The searching service is split between researcher and student produced material.
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