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4,214 Data sources

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  • NFDI4Ing Terminology Service is a repository for ontologies in the broad engineering domain. It aims to serve as a central access point to the latest ontology versions. Most of the ontologies in our service are managed in various Git repositories such as GitLab or GitHub. Only a few of them are still managed on self-hosted web servers.

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  • The Gene Expression Omnibus (GEO) is a public repository that archives and freely distributes microarray, next-generation sequencing, and other forms of high-throughput functional genomic data submitted by the scientific community. Accepts next generation sequence data that examine quantitative gene expression, gene regulation, epigenomics or other aspects of functional genomics using methods such as RNA-seq, miRNA-seq, ChIP-seq, RIP-seq, HiC-seq, methyl-seq, etc. GEO will process all components of your study, including the samples, project description, processed data files, and will submit the raw data files to the Sequence Read Archive (SRA) on the researchers behalf. In addition to data storage, a collection of web-based interfaces and applications are available to help users query and download the studies and gene expression patterns stored in GEO.

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  • The SciCrunch Data Dashboard is a data sharing and display platform that pulls information from primary data repositories. Anyone can create a custom portal where they can select searchable subsets of hundreds of data sources, brand their web pages and create their community. SciCrunch will push data updates automatically to all portals on a weekly basis. SciCrunch resource registry is the new name of the NIF registry.

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4,214 Data sources
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  • NFDI4Ing Terminology Service is a repository for ontologies in the broad engineering domain. It aims to serve as a central access point to the latest ontology versions. Most of the ontologies in our service are managed in various Git repositories such as GitLab or GitHub. Only a few of them are still managed on self-hosted web servers.

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  • The Gene Expression Omnibus (GEO) is a public repository that archives and freely distributes microarray, next-generation sequencing, and other forms of high-throughput functional genomic data submitted by the scientific community. Accepts next generation sequence data that examine quantitative gene expression, gene regulation, epigenomics or other aspects of functional genomics using methods such as RNA-seq, miRNA-seq, ChIP-seq, RIP-seq, HiC-seq, methyl-seq, etc. GEO will process all components of your study, including the samples, project description, processed data files, and will submit the raw data files to the Sequence Read Archive (SRA) on the researchers behalf. In addition to data storage, a collection of web-based interfaces and applications are available to help users query and download the studies and gene expression patterns stored in GEO.

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  • The SciCrunch Data Dashboard is a data sharing and display platform that pulls information from primary data repositories. Anyone can create a custom portal where they can select searchable subsets of hundreds of data sources, brand their web pages and create their community. SciCrunch will push data updates automatically to all portals on a weekly basis. SciCrunch resource registry is the new name of the NIF registry.

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